Hi all,

I got the following error while running recon-all on a patient dataset.
Kindly let me know how to proceed.

Thanks!
Sindhuja


Correction of the Topology
Finding true center and radius of Spherical Surface...done
Surface centered at (0,0,0) with radius 100.0 in 13 iterations
marking ambiguous vertices...
129422 ambiguous faces found in tessellation
segmenting defects...
51 defects found, arbitrating ambiguous regions...
analyzing neighboring defects...
      -merging segment 1 into 0
      -merging segment 2 into 0
      -merging segment 8 into 0
      -merging segment 5 into 7
      -merging segment 28 into 12
      -merging segment 35 into 31
      -merging segment 47 into 43
44 defects to be corrected
0 vertices coincident
reading input surface
/autofs/cluster/mscat/users/caterina/3T/recons-04082011/MS_pt20_recon/surf/lh.qsphere.nofix...
reading brain volume from brain...
reading wm segmentation from wm...
Computing Initial Surface Statistics
      -face       loglikelihood: -9.5482  (-4.7741)
      -vertex     loglikelihood: -6.9824  (-3.4912)
      -normal dot loglikelihood: -3.5307  (-3.5307)
      -quad curv  loglikelihood: -5.9945  (-2.9973)
      Total Loglikelihood : -26.0558

CORRECTING DEFECT 0 (vertices=50712, convex hull=8198)
Segmentation fault

recon-all -s MS_pt20_recon exited with ERRORS at Wed Oct 26 18:49:31 EDT 2011

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